Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909004.1_cds_XP_016459252.1_52798
CDS Infomation

[gene=LOC107782831] [db_xref=GeneID:107782831] [protein=uncharacterized protein At4g38062-like] [partial=5'] [protein_id=XP_016459252.1] [location=complement(43583..>47152)] [gbkey=CDS]
Sequence

TTGTGGATTGAGGAAATGGAAACAGTACATGAAGCACTAGATGAGACCAAACTTGAAATT
GAAAAGCTCAGGGAAAACTACCAAAGTAAAGCTGAGTTCTGCGATAACTTGAAACGAGCC
CACAACGAGCTGGTAACCAAGAATCAGGAGGCTAATTTGAAAGTAGAGAAGCTCACTCAT
GAATTGACTGGGAAAGAAGATGAACTTGCTGTCACGAAACAACTGTACGAAGCAATTGAG
ACGAAACTAAAAGATAAGGAGACTGCTGTCAGGCATCTAAGCTCTATAAATGATAAGCTT
CGTGCTGACTATGCTGAGATGCTTCGGAAATGTGAAGAAGAGAATAAAGGGTTGGCATTG
GCTTTAGATGATGCCAATGCAACCGATATGGATTTGGAGCATCAGATTCGTTCTCTCAAA
CAAGAAATTGAGGGGCTAAGGGAAGTTGCATCGGCTTCACAGAAGAAAAAGTCCTCGGAA
GCTGAGAAGAGAGCCAAAGACTCCAAAGAGCTGAGAAACAATAATGACATGCTACTGGAT
ATGGAGGAGGAAAACAGGAAGCTCGCAGATCAACTAAAATGGAGGAAGGAACAGTTCATG
AATCTGGAGGAGGCTCATGGCAAGCTCAGGCAACAGCTTCAAAAATGTGAAGAAGAGAAT
AAAGGGCTGGCATTGGCTTTAGATGGTGCTAACTCAAATAATATGGATCAGGAGCAACAG
ATTCGTTCTCTCAAACAAGAAGTTGAGGGGCTTAGGGAATTTGTATCTGCTTCACAGAAA
AAGTCCTCGGAAGCTGAGAAGAGAGCCAAAGCATCCAAAGAGCCGAGACACAATGATGAT
ATGCTACTTGATATGGAGGAGGAAAACAGGAAGCTCGCCGATCAGCTAAAATGGAAGAAG
GAACAGTTCAGTCATCTAGAGGAGGCTCATGGCAAGCTCAGGCAACAGCTTCGAAAATAT
GAAGAAGATAATAGAGGGCTGGCATTGGCTTTAGATGGTGCAAATGCAACTAATTTGGAT
CAAGAGCAACAAATTCGTTCTCTCAAACAAGAGATTGAGGGGCTACGGGAGTTTTTATCA
TCTTCACAGAAGAAGTCGTCTGAAGCTGAGAAGAGAGCGAACGTATCCAAAGAGCTGAGA
CACAATGATAATGTGCTACTTGAGATGGAGGAGGAAAACAAGAAGCTCACTGATCAACTC
AAATGGAAGAAAGAACAGTTCAGTCATTTGGAGGAGGCTTATGGAAAACTCAGGCAACAA
CATCGAGAGGAGGAGAAAGAATGGGTAAAGGAGAGATGCACGTTGCTAGATGAGATTTCT
AAGCTGCAGTTGAATTTAGATTCTCAGCTTAGAATATCAAAAGATCTTGAAAGCCGTTTG
TGGATGTGCAATCAGGCTTTAGCTCATGAAGAAAGCAGGAGAAAGCTACTGGAAGTTCAA
CTTGCCGAGTCTAAAACATCCTTTGATAGTGTCTGTGCAGAGTATGAGGAATCAAAGTCT
ACAATTGAGAGCTTGACAAGTCAGAGGGACAAAGAAATCGCAAATCTAAGAGACATATTG
GGCACAAGGGATACACTTCACAAGGAAATGGAGTACCAATTCAGGAGGCTAGAACAAGAA
AATCATGAACTGATGACATCCCTTAAAGAATTCCAGGAAGCGAAAATTCAAGAAGCTGGA
GCTTCTTCTTGTTCGTTGTCAAAACTCCGAAACAAGCTCAAAGGCGTGGAGCTGGTGCAC
AAGGACTGTTTTAGTAATCTCAAAGCCAAAGAAGCTGAATGGGCTTCTAAATTGGAGCAA
CTTACGTGGGAGCTCAATTGTTGCAAGTCTTCATTACAGAGCAAAGGCACTTTAATAACT
GAACTTCAAGAGGAGTTAGAGACATGTGAATTATTGACACTGCAGTTAACGCTACAGAAT
GAGGAGACTTCGATGATGCTTTTAGTGTTAAAATCTCAGTTTTTGGAGCTCCATCAAAGA
GTTGCTGATGATTATGCTTCTATGGAACTGGGAAAGAGAGAAGGAGCTGAGAATATCTCC
ACTCTAATCAAGCAGTTGAATACGAAGAATGAAGCTCTTGTTAGAGTTCAGAAAGATCTT
GAAAAGGAGCGTGAAAAGGTAGCACTGCTATCAGAAAAGGTCGAGTCGTTGAACTCTGAA
GAACAACAACAGCAGCTTCCTTTACAAAGAGAGGTTGATACACTGAAGAAAATGCTGAAA
GAAGCATCGGCTTCTCAACATCATCTAAAGGAGCAGGTATTGCATACAAAGAGTGACTTG
AAACAAGTTCGCGATGCCTTGGATAGAGCAAATGAAGAACTAGCTGAAAGTTTCAGTGAA
GGAAATGAACTGGAATTTGAATTGCAGGTGTGGAAATCTGTTGCTGAAAAGTTGAAAGCC
AACCTGGAAGAAAACCATCAAATGAGGAGACAAGTAGAAGCCTCCCTTCTTGCCCAAGCC
GATGTTGAATTTGACCTCAAACTAGAGACAGAAAGCCTTGAACTCAAGCTAGCAGAAAAA
GATAGAAGAGTGACTGAACTCCAGCAGCAGCTCTTCGACTTGAACGAGGAACTCACAAGA
AGGGAACAGAAAACACTGCTTAATGTTGAGGACAAGACGATCTCTCAGGATCTTCAGAAG
GAGGTGGAGTATTTGGAGCAAGAGTGGGTGAGAAAAGAGCTTGGAGGTGCCATTTTAGCA
CAAGTGGAAGCAGAAACAAAGCATAAGAACGAGAAAGAGAGCCTCCACCAGCTTGTTGAA
GAGAAAGACCACAGAATATATGATCTTCAGAAGGAGGTGGAGTATTTGGAGCAAGAGTGG
GTGAGAAAAAAAGAGCTTGAAGGTGCCATTTTAGCAAAAGTGGAAGCAGAAACAAAGCAT
AAGAATGAGAAGGAGAGCCTCCACCAGCTTGTTGAAGAGAAAGACCACAGAATATATGAT
CTCCAGCAGCTTGTTAACTCACTGGAAATTGAGTTTGAAAGTTCAACTAGCTCATTTTCA
GTCAGACTCTCAGAGATGCAAGCAGAGGTTGATATGTTTCATAAAACTTGGGAGAAGATG
AGAACGGCTGAGATTCTGAAGGAGATCGAAATACAGATGAGGAACTTGGTGATTGCTGAG
TTGGAAAATAATTTGTCCGATTCTGTTGGAGAAAGGACAGAGCTTGAAGCTGAGCTAGAA
GCGAAAAGATCAGAGACAGACATGTTGCAGCTTAGACTTGAAAAACAAATAAGAAGTTCA
GATATTGTGATCAAGAAACTTCATGGAGAAAAGGCGAAGCTTCTTGACGATGTTAATAAA
TTGTCATCAGACAAGGACAAGTTGCTTGATACTTTCATGGGACTATTAGAAAGAACTGAC
CTGATATCTAAGGAAGATATGCAGTTAAGTGTGAGTTTGGAAAGGATGGTACAAAACTGT
GACAACAACAGTATGTTGGAAACAGACTTGAAATGGGATAATGAATTTGATCCTGTTAAA
GAGAATAAAAGCAGACAGCCCTCAACTCCAACCAAGAGATTAGAAGCTATTATTGATGAT
AGATCGCCGTTGAGATCTCTCAACAATTAG

Peptide Sequence

PEP ID

XP_016459252.1
PEP Infomation

PREDICTED: uncharacterized protein At4g38062-like, partial [Nicotiana tabacum]
Sequence

LWIEEMETVHEALDETKLEIEKLRENYQSKAEFCDNLKRAHNELVTKNQEANLKVEKLTH
ELTGKEDELAVTKQLYEAIETKLKDKETAVRHLSSINDKLRADYAEMLRKCEEENKGLAL
ALDDANATDMDLEHQIRSLKQEIEGLREVASASQKKKSSEAEKRAKDSKELRNNNDMLLD
MEEENRKLADQLKWRKEQFMNLEEAHGKLRQQLQKCEEENKGLALALDGANSNNMDQEQQ
IRSLKQEVEGLREFVSASQKKSSEAEKRAKASKEPRHNDDMLLDMEEENRKLADQLKWKK
EQFSHLEEAHGKLRQQLRKYEEDNRGLALALDGANATNLDQEQQIRSLKQEIEGLREFLS
SSQKKSSEAEKRANVSKELRHNDNVLLEMEEENKKLTDQLKWKKEQFSHLEEAYGKLRQQ
HREEEKEWVKERCTLLDEISKLQLNLDSQLRISKDLESRLWMCNQALAHEESRRKLLEVQ
LAESKTSFDSVCAEYEESKSTIESLTSQRDKEIANLRDILGTRDTLHKEMEYQFRRLEQE
NHELMTSLKEFQEAKIQEAGASSCSLSKLRNKLKGVELVHKDCFSNLKAKEAEWASKLEQ
LTWELNCCKSSLQSKGTLITELQEELETCELLTLQLTLQNEETSMMLLVLKSQFLELHQR
VADDYASMELGKREGAENISTLIKQLNTKNEALVRVQKDLEKEREKVALLSEKVESLNSE
EQQQQLPLQREVDTLKKMLKEASASQHHLKEQVLHTKSDLKQVRDALDRANEELAESFSE
GNELEFELQVWKSVAEKLKANLEENHQMRRQVEASLLAQADVEFDLKLETESLELKLAEK
DRRVTELQQQLFDLNEELTRREQKTLLNVEDKTISQDLQKEVEYLEQEWVRKELGGAILA
QVEAETKHKNEKESLHQLVEEKDHRIYDLQKEVEYLEQEWVRKKELEGAILAKVEAETKH
KNEKESLHQLVEEKDHRIYDLQQLVNSLEIEFESSTSSFSVRLSEMQAEVDMFHKTWEKM
RTAEILKEIEIQMRNLVIAELENNLSDSVGERTELEAELEAKRSETDMLQLRLEKQIRSS
DIVIKKLHGEKAKLLDDVNKLSSDKDKLLDTFMGLLERTDLISKEDMQLSVSLERMVQNC
DNNSMLETDLKWDNEFDPVKENKSRQPSTPTKRLEAIIDDRSPLRSLNN

Transcript Sequence

Gene sequence data has not been registered.